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The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … mass spectrometry-based methods to analyze metabolites from a wide range of biological and environmental samples — …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … Inventory of Composable …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun sequencing. …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … interactions with their environments and with each other, from defending against predators to aiding in symbiotic …

… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … of its kind, with an interactive browser that allows algal scientists and enthusiasts to look deep into more than … researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome …

… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … QC Protocol DNA Extraction 101 : tips, kits, and protocols (from PacBio) Guidance for sample collection and storage …

… … DAN: You’re listening to the US. .Department of Energy Joint Genome … sampling which we would look at different particles in the ocean and look at the micro organisms on those particles, as …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … around the world. … Integrated Microbial Genomes and Microbiomes … Integrated Microbial Genomes — Plasmid …