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… about several different pieces of her work, including bacterial quorum sensing and its effects on regulation of … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … like a lot of people hedge their way into natural products by starting out in synthesis and then discovering more-- …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … search away! If you like these primer episodes, let me know by emailing us to [email protected], or on twitter @JGI or … ALISON: Hmm. It kind of – it’s kind of like I’m smelling bacterial perfume. I mean – but it’s purposeful so it’s some …

… organs that solely house– whose sole function is to house bacterial associates. And so the one that the Hawaiian … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …

… The “Great Plate-Count Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … such hypotheses. In particular during an era of ‘homology creep’, function prediction as purely based on annotation …

… works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. Integrating genomics with … state-of-the-art instrumentation and informatic approaches.By bridging genomics with metabolomics, the Metabolomics …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … hard it was – it felt kind of like training for a marathon by running at a high altitude! And a lot of us moved on to … specialist on sponges. And he’s worked on lots of different creatures. And you can find sponges everywhere in the ocean, …

… Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … for comprehensive access to information regarding genome and metagenome sequencing projects, and their associated metadata, … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … protection of certain types of data to support their use by those generating data. The JGI Data Policy applies to … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… people that wants to study oceanography and was fascinated by the oceans, though I’ve always lived by the sea in the … was really before– or kind of around about when the first genome sequencing was done. But natural products– marine … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… software includes: gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate methods …

… The mission of the Joint Genome Institute is to serve the scientific community as a … performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and …