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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … change over time, if I constantly give it this kind of selection pressure really. And we have pipelines for that. … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This … An assay used for profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial … Marnix and his collaborators have a fantastic set of software tools for exploring secondary metabolite …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched … for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … challenges in the sourcing, recovery, and utilization of critical minerals and materials. The proposal submission …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so … This is the first episode of Natural Prodcast, a podcast produced by the US Department …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … are the RiPPs, which stands for “Ribosomally synthesized and Post-translationally modified Peptides.” You’ll … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Secondary Metabolites Program
… Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … communication. Studying how these compounds are biosynthesized and their roles in the environment, can unlock new …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … and advanced genomic analysis to explore the rich diversity of fungi and algae. These organisms play a critical role in …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … to predict or just understand better the language of microbial cell-cell communication. And he told us about his … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that …
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much …
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Natural Prodcast Episode 17: Cassandra Quave
… Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … that we found, indeed, that both formulations had some antimicrobial properties. But the one that was used in …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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