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… SMC – which is the new Secondary Metabolism Collaboratory data portal I’ve been working on with my colleagues Drew … Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a …

… The JGI’s data stewardship expertise and infrastructure enable a broad … discoverability and accessibility are critical requirements for amplifying the JGI’s impact. Data generated from a single investment will be reused for further science.  Notice Effective July 27, 2026, the …

…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … Synthetic Biology Informatics Group : a team that develops data science tools for workflow management and novel …

… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. … FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals …

… staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team science and … Systems Biology Knowledgebase and the National Microbiome Data Collective.    … biotechnology through analyzing and harnessing genomic information from plants, fungi, algae, non-medical microbes, …

… proposal call . This represents a unique opportunity for researchers to request the capabilities and expertise of … science, accelerating discoveries and developing transformative bio-based technologies that address challenges in … capabilities, they then ship samples—such as DNA and RNA for sequencing—to JGI. Users are responsible for covering …

… Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week … culture-disconnected. Like we’ll take some soil samples and sequence all the bugs out of that or whatever. And so I was … apart from each other. So in the phytochemistry lab, we’re preparing the drugs, the master plates for testing. In the …

… of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … every episode we put out. I actually put a lot of time into preparing those transcripts, so I hope somebody’s going to … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …

… See below for a list of Frequently Asked Questions about our proposal … Many of the submissions are done using web-based forms.   To view the proposal templates, go to the proposal … don’t already have an account) and click the “Begin” button for the call you are interested in. All proposals must be …

… It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for the … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … algal genomes, a lot of effort goes into generating these data sets. There’s a lot of manual work in terms of the …

… the idea of taking all the different natural products data that there is and putting things, coalescing them, so … I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the …

… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh … so starting from some of the enzymes that we had the most data on and knew the most about, working with my …