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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your … completed. You can view the status of your projects at any time by accessing various reports on the JGI Portal . Use …
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Prokaryote Program User Advisory Committee
… management and strategic objectives of the microbial and metagenome programs and report back to them. The Committee …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of … genes with functions useful for forest recovery, this study sheds light on how microbes contribute as a forest …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … is a chemical compound called geosmin that’s produced by soil bacteria that live all over the place. So that smell of … I’m definitely seeing why this is such an important area to study. Okay, what’s your third story?  DAN: The third story …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
… viruses impact the release of greenhouse gases from Arctic permafrost. But to see what they’re doing, he first needs their DNA.   …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … So like, as an undergraduate, I was like, no, I’m going to study architecture. I like making things and designing … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …
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CSP Functional Genomics
… genomics research and to help them translate genomic information into biological function.  The emphasis is on projects … Proposals to this call may be submitted to the JGI at any time using a simple web-based form and are reviewed …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … in natural products as an undergrad. So for me, it was studying sort of the interface of chemistry and biology … the rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence …
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Assembling the Marine Metagenome, One Cell at a Time
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. … in total. Proposals for this call may be submitted at any time as brief white papers. Applicants may submit up to two …
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Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got … could imagine if you have two colonies of bacteria in the soil or something and they’re competing with each other, if …
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