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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies The Science The  Metagenome Stability … and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool … The work conducted by the US Department of Energy Joint Genome …
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Mining Metagenomes for Cas Proteins
… to accurately edit genomes (that is, repair gene mutations, and either delete or add genes in a precise fashion) … author Lucas Harrington was a graduate student from study senior author Jennifer Doudna’s lab, and he worked … by searching for Cas12d homologs across IMG/M’s assembled metagenomic data. It turned out that some of these were …
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Targeted and shotgun metagenomic approaches provide different descriptions of dryland soil microbial communities in a manipulated field study
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a … a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees … genes with functions useful for forest recovery, this study sheds light on how microbes contribute as a forest …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National … in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… Congratulations to Tanja Woyke, who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for the … techniques including single-cell genomics and metagenomics. They cited her “landmark” 2013 Nature paper , …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school … of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), embarked on a pilot project with biology students from Boca Raton … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Bacterial barcoding facilitates plant microbiome studies.
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Natural Prodcast Episode 5: Brad Moore
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … So like, as an undergraduate, I was like, no, I’m going to study architecture. I like making things and designing … Patrick would spend time between our two laboratories doing metagenomics, some genomics. We were a little concerned …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal … on new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – … new experimental capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … in natural products as an undergrad. So for me, it was studying sort of the interface of chemistry and biology … me. And I could combine my passions in different areas to study how these molecules made, how do you test the …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen … early 2020, people all over the world have been forced to confront the awesome power that viruses have to affect nearly … every aspect of our daily lives.  But for researchers who study viruses that infect organisms much smaller than …
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