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Plant-Microbial Interactions Group
… how plant cells respond to low nutrient conditions (low nitrogen or low phosphorus), and how cell identity impacts …
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CSP Functional Genomics
… ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …
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Natural Prodcast Episode 24: Jackie Winter and SMC
I think that’d be fun. Yeah. Let’s do it. What if we just start like swearing, bring out our New Yorkers in us. … thought it would be good to spend maybe a couple of minutes just talking to you and introducing you more properly to the … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up …
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IMG Group
… data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing state-of-the-art … Development and maintenance of the Integrated Microbial Genomes (IMG) data management system … As part of this …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and …
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Viral Genomics Group
… al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et …
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Micro-Scale Applications Group
… technology in order to enhance the quality of single-cell genomes and directly link functional information with … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling … activity (BONCAT+FACS). To provide additional functional insights into microbial genomes, the JGI now uses laser …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … which are made up of chains of amino acids. “Peptide” is just another word for a small protein. And it turns out that … from there.  ALISON:  I want to hear more about that story. Just a little bit! ERIC:  So Which part do you want to know …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… in the future, the evolutionary past may hold key insights. The way that plants process nutrients has a rich … as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … it possible to process more molecules efficiently, with just the right tool for the job. For enzymes in specialized …
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Products
Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact … library types and quality of finished product depend on genome. Selected genomes will be improved based on …
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Natural Prodcast Episode 18: A CSP Primer
Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … who wants to try out something smaller scale, or if you’re just curious to know more, then I really encourage you to …   DAN UDWARY: All right. Well, when it was Alison, I just said, hey, Alison. MENAKA WILHELM: Yeah. DAN UDWARY: …
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Dynamic nitrogen fixation in an aerobic endophyte of Populus
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