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Natural Prodcast Episode 18: A CSP Primer
… with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the best. … will be too. But, today, I got the chance to work with my JGI colleague Menaka Wilhelm, who is the host of JGI’s other … is kind of like a CSP, but you would be proposing a larger project that requires the work of two or more DOE user …
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Natural Prodcast Episode 22: Alison Narayan
… our conversation with Professor Alison Narayan, from the University of Michigan. I hope she’ll accept this … niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical capabilities of flavin … of “biocatalysis,” about her DNA synthesis project with the JGI to explore flavin monooxygenases, and what we all need …
Learn more
Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship opportunities … opportunities and ultimately, an understanding of the JGI’s role in enabling complex biological and environmental … The JGI and UC Merced have had a long-standing internship … Modeled on the JGI-UC Merced internship program, a similar collaboration …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … bioproduct applications. The program has completed over 70 projects, including gene synthesis, combinatorial pathway … to refactor entire chromosomes, such as a yeast chromosome project. These advancements contribute to the development of …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge … with isolate collections to complete large-scale sequencing projects, including 10,000 Actinomycetota strains and 10,000 … and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and …
Learn more
Natural Prodcast Episode 24: Jackie Winter and SMC
… to talk about all the cool work she’s doing over at the University of Utah. So, you’ll be hearing about microbiology … Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … DAN UDWARY: Nothing to be sorry about. Yeah, no, your project was really cool. The vanadium haloperoxidases are …
Learn more
User Programs
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.  … Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status CLOSED CLOSED … CLOSED Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of …
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Frequently Asked Questions: Proposal Submission
… ; click on the call link to see specific details including project types supported, sample/capacity limits, and … go to the proposal submission page , login using your JGI account (create one here if you don’t already have an … or longer to obtain with no guarantee of approval.    JGI staff are not eligible to submit proposals, or to be …
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Metagenome Program
… viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative … analysis through the IMG/M platform. Further, the JGI partners with the National Microbiome Data Collaborative … to information regarding genome and metagenome sequencing projects, and their associated metadata, around the world. …
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JGI-TMF Critical Minerals and Materials Call
… free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. All JGI data is made publicly available in accordance with the JGI’s Data Policy . In cases where the JGI provides … User Portal . All proposals undergo technical review by JGI staff as well as staff at the other participating …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of Energy … the human genome, an arms race was being waged. In the JGI@25 video below, Susan Lucas, former JGI Production …
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FICUS-NERSC/KBASE
… expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … as part of the FICUS initiative. Proposals submitted to the JGI-NERSC-KBase call do not use the Letter of Intent; rather … review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating …
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