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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … users through a BER data ecosystem.  A data ecosystem is a connected resource where data from different organizations is … following ways: Data integration is critical to exploring research questions in a comprehensive, multi-disciplinary …
Learn more
Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity with gene …
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Plant Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … better understand the plant-associated terrestrial world. Research Team    …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing … sample processing and sequencing capabilities. The Genomic Technologies Group, which includes the Sequencing … An assay used for profiling transcription factor binding sites across entire …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … The DNA Synthesis Program plays a central role in advancing functional genomics, focusing on developing …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.  … FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status …
Learn more
Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. … algae and plants. These compounds are key to organisms' interactions with their environments and with each other, …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our … by those generating data. The JGI Data Policy applies to research data and analysis products (referred to as “data” … : A period in which data is not publicly available in JGI systems or outside repositories. Full access is granted …
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Natural Prodcast Episode 14: Nigel Mouncey
… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, …
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and … The Plant Program advances our understanding of plants’ biological and ecological roles to foster …
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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art … genomics research and to help them translate genomic information into biological function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … a major transition of biology into data science.  Research in the Kyrpides group focuses on Microbiome Data … The research efforts of the group have concentrated in demonstrating the power of data science in tackling grand …
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