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Exploring Phages at JGI
As a first-generation college student, I never really entertained the possibility of working at a national …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint … of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … of scientists over the years that have essentially devoted their life to collect microorganisms all over the world for …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine … mutualism or parasitism between some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, … how these hosts and hitchhikers coexist is key for understanding their impact on wider ecosystems, but …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy … welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … around us. And we actually don’t know a lot about them by their mate, what their role in nature, how have they been …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Congratulations to the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or … was first author on a study featuring a new program called iPHoP , which combines and evaluates multiple predictions to …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint … of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … about sponges, can you maybe explain what’s going on with their biology and why they’re so important to natural …
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Natural Prodcast Episode 17: Cassandra Quave
… … Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week … the language of plants, and use that as a way of treating their patients. And as I read more and experienced more, I …
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Learning to Look
Machine learning approach significantly expands inovirus … answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters … to identify a certain type of bacterial viruses or phages called inoviruses, which are filamentous viruses with …
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and … is a central repository, which has all the structures and their corresponding gene clusters, and their MS and MS-MS …
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Tapping the treasure trove of atypical phages
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of … material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … into the coding potential of candidate phyla  to decipher their possible roles in the environment, establish …
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