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Offerings & Capabilities
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Sequencing Technologies & Products
… profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …
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Examples: Successful LOIs & Submissions
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Project Management Office
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Phytozome: a comparative platform for green plant genomics
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Natural Prodcast Episode 12: Nadine Ziemert
… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … the University of Tübingen in Germany. Like me, she’s a genome miner and has been involved with the AntiSMASH and … her review in natural product reports on the evolution of genome mining and microbes with Mohammad Alanjary and …
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The JGI Data Portal: Improving User Experience
… download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is currently only … “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to … of the plant portal, weren’t able to complete this task. Improving the download process for this group of users …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple … bioenergy feedstock crops are increasing their yields and improving their abilities to adapt to extreme environments …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science … global population, drought is an obstacle toward improving crop yields for food and fuel use. In Nature … such as drought. This information can be applied toward improving crop yields in other grasses. The team conducted …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … with Ben and his group to work on sequencing, synthesis and genome mining technology to help access complicated natural … past two decades is that today, one thing is the ability of genome sequencing. So, in the past the natural products have …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it … ferns. The genome is available on the JGI’s plant portal, Phytozome . Researchers hope to have demonstrated the … The work conducted by the US Department of Energy Joint Genome Institute is supported by the Office of Science of …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … gaps in the under-sampled area of the plant phylogeny and improving genome annotations. For that undertaking, new … hosted. The first one is the JGI plant portal called  Phytozome . There, you can query a single gene and look at …
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