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The Metagenome of an Anaerobic Microbial Community Decomposing Poplar Wood Chips
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Metabolomics Program
… of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome … and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and … research. This program integrates cutting-edge metabolomics with genomic data to gain insights into how small molecules …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… of secondary metabolism. Hey everybody, this is Dan with episode 13 of National Prodcast. This continues our … of a particular part of the Streptomyces phylogenomic tree, then you will be in a position to say, this group of … that will actually protect the fungal farms from other fungus that want to take advantage of that resource. So in …
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pHBMT1, a BAHD-family monolignol acyltransferase, mediates lignin acylation in poplar
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Influences of Climate on Phyllosphere Endophytic Bacterial Communities of Wild Poplar
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Salicylic acid activates poplar defense against the biotrophic rust fungus Melampsora larici‐populina via increased biosynthesis of catechin and proanthocyanidins
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Comparative transcriptomics uncovers poplar and fungal genetic determinants of ectomycorrhizal compatibility
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Natural Prodcast Episode 19: Bill Fenical
… and we talk about an ongoing project I’ve been working with him on as an exploration into the secondary metabolism … into the lab for study. DAN UDWARY: Where were you on the timing of that compared to some of the other guys that are no … is a very horrible genus. Because first of all, it’s not a fungus, so why would you have m-y-c-e-s as a suffix? But …
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The Science To … revealed key metabolic pathways and metabolites associated with the tree’s stress response. Finally, using …
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Workforce Development & Education Outreach
… We offer internship opportunities through working directly with specific universities, continuing education programs in the Bay Area, and established programs affiliated with the Berkeley Lab A-LIFT team.    Overall, our aim is to … JGI-UC Merced internship program, a similar collaboration with AAMU was launched in 2024.  …
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Secondary Metabolites Program
… These molecules, which are not essential for fundamental growth, provide critical advantages to the organisms … to tap into the largely unexplored biochemical diversity within secondary metabolites, expanding their potential applications in the bioeconomy including biofuels, biochemicals and sustainable agriculture. …
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Multiplex knockout of trichome-regulating MYB duplicates in hybrid poplar using a single gRNA.
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