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Data Policy
Facilities Integrating Collaborations for User Science (FICUS) initiative, Director’s Science (DS), Biological and …
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Micro-Scale Applications Group
JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal … imaging with various microscopy techniques … Stable isotope probing metagenomics: … Single cell: … For further details, …
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Frequently Asked Questions: Proposal Submission
… in. All proposals must be written in English. … The CSP and FICUS calls are open to both domestic and international … submitting proposals? … Who is eligible to submit CSP and FICUS proposals? … How can I increase my chance of success? … What can I request from the CSP and FICUS programs? … How much will it cost me to sequence or …
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DNA Synthesis Program
… a stepwise approach for strain development, requiring cycles of construct design, building, and characterization. …
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Microbiome Data Science Team
… types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes … GEBA-type strains project ), the delineation of host-virus interactions, the exploration of the functional dark matter … Schulz F, et al. (2020) Giant virus diversity and host interactions through global metagenomics. Nature …
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User Programs
… cost to the user and no granting of funds.   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… of Chemistry and the Department of Medicinal Chemistry and Molecular Pharmacology there. We talked about several … so the goal here then is to understand these regulatory mechanisms so that you can turn on the natural product, say … BETSY PARKINSON: Yeah. So there are two different processes. So for the children's museums and things like …
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Natural Prodcast Episode 17: Cassandra Quave
… are probably quite familiar with GNPS as a tool, and using molecular network analysis, too, as an early step. That’s … better could be perhaps to take deeper looks at the interactions that organisms have, not just within the same … actually cross kingdom. So I’m thinking about what are the interactions that bacteria have with plants, what’s going on …
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Natural Prodcast Episode 12: Nadine Ziemert
… so I really had to dig into all the different biosynthetic mechanisms and into phylogeny. And I had to look at so many … And really, it would be nice if there was just a certain molecular switch that you could put on to get them all …
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Approved Proposals
… the Facilities Integrating Collaborations for User Science (FICUS) program.  …
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Offerings & Capabilities
… and  Operations enable the JGI to focus on expanding molecular capabilities and functional genomics, scaling …
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Natural Prodcast Episode 11: Marnix Medema
… suppressive effect. But well, causal gene so that the mechanisms were still largely unknown. And thus far in the … sometimes correlated or anti correlated, also with other cellular functions in the same and as it was other bacteria … that the expression of these gene clusters play in these interactions. But also things like trying to predict at …
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