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Data Ecosystem
… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both expertise …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … with Marnix Medema , from Wageningen University in the Netherlands. Marnix is still pretty young, but he’s been … that — fingers crossed, tenure relying on this — antiSMASH version 1 comes out. The reviewers were not kind to my …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … But today, you have so many other say morphological, genetic, you know say sugar, lipid composition – so I think … to isolate the proteins. The proteins are the biological version of the catalyst to catalyze the production of the …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … in print, but we live in the information age and the ebook version is available at most online sellers. I think it’s as … developed to the point that you could understand the genetics of secondary metabolism, it became possible to do …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … the program enables the design and synthesis of complex genetic pathways and biosystems. It The program fosters … analyses of fungi and community annotation. … Phytozome is the JGI's Plant Comparative Genomics portal. …
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University of California, Merced Internship Program
… experience at the JGI, the Genomics Internship Program soon expanded to include undergraduate students. To date, more … than 80 UC Merced students have contributed to the research of numerous JGI scientists. Interns say their experiences … industry-level work and coding. Receive mentorship, network and connect with Lab staff. Increase their technical …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … & quality requirements for samples submitted to the DOE JGI. Plate-based Preparation Guidelines DNA Preparation …
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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific … next review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating … projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, …
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Natural Prodcast Episode 17: Cassandra Quave
Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … can’t recommend it enough to this audience. The hardcover version is out now in stores and online, and there’s an … without giving any benefit back to the owners of that genetic material? So this is also relevant to bacteria. If you …
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Secondary Metabolites Program
Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … these hidden biochemical resources by exploring the genetic pathways responsible for their synthesis. The … to identify RNA polymerase-sigma factor targets, and have expanded the sigma factor-target pairs twofold. We are also …
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User Programs
… synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … capabilities of multiple user facilities Investigators with DOE mission-relevant projects that call for expansive …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at Lawrence … search away! If you like these primer episodes, let me know by emailing us to jgi[email protected], or on twitter @JGI or …
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