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JGI Mural
The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of iconic … to advancing the frontiers of environmental and energy genomics. Click on the images below to learn about the …
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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes … Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. …
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Open Education, Open Minds
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Single Cell Research Group
Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected … Chris Rinke: Research Officer, Australian Centre for Ecogenomics Patrick Schwientek: Cofounder & CTO, Oralta … …
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FICUS-NERSC/KBASE
… community as a user facility pioneering functional genomics to solve the most relevant bioenergy and …
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User Programs
FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should …
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Products
Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to … Program Product Description Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA Synthesis Constructs <5kb … based on feasibility and scientific merit.  Arizona Genomics Institute will produce HMW DNA needed for these …
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Who We Are
… around 280 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at …
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New Lineages of Life Group
… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify … metagenomics. Nature Reviews Microbiology volume 20, 721–736 JC Villada, F Schulz (2022) The endosymbiotic box of …
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Plant-Microbial Interactions Group
… are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … barcode-based genetics (RB-TnSeq), and computational genomics to better understand the plant-associated … rhizobacterium (PGPR) Pseudomonas simiae WCS417. One suggested function of these phage genes is the …
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Tiny Earth: A Big Idea for STEM Education and Antibiotic Discovery
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Nigel Mouncey
Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a … interest in microbial genetics that started with his education and carried forward into his roles as a senior … international forums. Breaking the Wall of Environmental Genomics … Jensen, R. O. et al. 2024. Phylogenomics and …
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