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Single Cell Research Group
… material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial metabolism … Director of Product and Market Development, Twist Bioscience Scott Clingenpeel: Industrial Hygienist, Berkeley …
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User Programs
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics … capabilities of multiple user facilities Investigators with DOE mission-relevant projects that call for expansive …
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Natural Prodcast Episode 14: Nigel Mouncey
Genome Institute and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … check it out. You can get more info at usermeeting.jgi.doe.gov . And I’ll be sure I put that link in the show …
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Data Ecosystem
… as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence … Berkeley, California.  Our location at the IGB fosters team science and collaboration with partner organizations such as …
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Metagenome Program
… evolutionary time scales.The Metagenome Program combines large-scale, time-series metagenomic data with detailed … environmental viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative …
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Natural Prodcast Episode 23: Aaron Puri
… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … Alison is no longer with us… She’s alive! She just doesn’t work for JGI anymore! [LAUGHTER] AARON PURI: Yeah. … or the genes that could encode for that right next to a larger biosynthetic gene cluster the products of the …
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Natural Prodcast Episode 16: Marcy Balunas
I didn’t know how to get towards that.  Organic chemistry doesn’t really help with getting to something other than the … do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t … we talked and I’ve noticed that you stay focused on the science and I think that’s great. But I spend a lot of time …
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Natural Prodcast Episode 12: Nadine Ziemert
Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Welcome … was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … outside my yard or so. Also, what we wanted to look at is, does it make a difference if I go today and tomorrow? Can I …
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Natural Prodcast Episode 10: A Primer on Genome Mining
Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Welcome back … to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … genome mining is, if I want to explain that to someone who doesn’t know much about genetics or anything else, science …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … on JGI policies and practices that affect users and their science including technical capabilities offered, proposal …
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How to Submit Sequencing Samples
… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … & quality requirements for samples submitted to the DOE JGI. Plate-based Preparation Guidelines DNA Preparation …
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