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Single Cell Research Group
… candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great Plate-Count … first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated bacteria, still persists to date. Research Team    …
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Industry Engagement Program
… As a National User Facility, the JGI serves more than 2,500 users that predominately come … the public sector: academic and government institutions — with capabilities that had remained largely unknown and … leading industry and academic organizations with the DOE, National Laboratories, and User Facilities — as well as …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… Submit research proposals  here that integrate genomics with nanoscale science, accelerating discoveries and developing … Access to the Molecular Foundry and use of JGI capabilities is free. The JGI supports remote users. … subsequent processing from that point. JGI provides users with various outputs free of charge, including data such as …
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Natural Prodcast Episode 1: The Primer, Part 1
… Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey … for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at Lawrence … questions or comments, you can contact us on Twitter at @JGI or @danudwary , or by email to jgi[email protected] . We’d …
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Natural Prodcast Episode 8: Eric Schmidt
… Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey … metabolite peptides. And there are two ways that nature does this. The more well-known secondary metabolism systems … can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have …
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Publication Policy
… of this policy is to establish communication norms around JGI contributions, ensure that all contributors to a …    Authorship Guidelines JGI will provide all users with a list of JGI staff who contributed to their project, … Feel free to reach out to your Project Manager or JGI Science Program lead(s) to discuss authorship at any point. …
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Natural Prodcast Episode 17: Cassandra Quave
… in the School of Medicine and College of Arts and Sciences. She’s an ethnobotanist and the herbarium curator … people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … And just because you do a field study in a location doesn’t mean that you’re going to have this massive economic …
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Metagenome Program
… in their natural environments. This work encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. … insights into microbial diversity and metabolic potential, with implications for energy production, environmental …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Welcome back … to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … genome mining is, if I want to explain that to someone who doesn’t know much about genetics or anything else, science …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge … to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and including …
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Natural Prodcast Episode 19: Bill Fenical
… things I want to make sure that we talk about. You have a JGI project going with us that we want to talk a little bit … concentration of calcium, and so on. And what difference does it make? The idea that you would say marine life make … to then switch from financial support from the National Science Foundation to financial support from the National …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … long, it’s definitely because we like talking about our science. So, sorry, but not really sorry. I haven’t …
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