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Project Management Office
PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working … launching the user’s project. See below for details on each step. … Please review our FAQ in advance of contacting the PMO office.  … Before work can start on any …
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Natural Prodcast Episode 3: The Primer, Part 3
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, and … is here ) so you understand what’s happened so far in the conversation between me and Alison. In the previous episodes … to find the precursor sequences. Those species are long dead. And if the DNA sequences have been carried through …
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the … of them to be highly related to enzymes that we have been studying since day one in my lab that do oxidative … through site-directed mutagenesis, we would end up with dead enzymes. So often, when you start monkeying around with …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the Biological and Environmental Research program, the Joint Genome Institute … advanced genomic capabilities, large-scale data and professional expertise to support the global research community in …
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Game On: High School Students Drive Everglades Metagenomics Study
… a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project … Jonathan’s email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … do an environmental microbial community (metagenomic) soil study in an untouched region of the Everglades, the …
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Natural Prodcast Episode 6: Marc Chevrette
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode 6 … terrible. I was able to clean it up quite a bit, and the conversation was so interesting that I wanted to include it. … academia. So I could focus on those without looming board deadlines. ALISON: Yeah, it sounds like a good choice if the …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic … information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. …
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Natural Prodcast Episode 9: Roger Linington
… back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser … natural products science as a field, we have arguably been studying microbial natural products in an ordered way for … an enormous amount of time and resources and money in studying this field. Yet we don’t really know what we know. …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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Metagenomics reveals niche partitioning within the phototrophic zone of a microbial mat
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Natural Prodcast Episode 5: Brad Moore
Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … So like, as an undergraduate, I was like, no, I’m going to study architecture. I like making things and designing … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …
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Natural Prodcast Episode 18: A CSP Primer
… round of episodes. If you stick around for the next few months, you’re going to hear my last interview with my … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. … have a lot of good information on each call, what are the deadlines for our large call. We have letters of intent. So …
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