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… begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to … The deliverables can range from raw sequence data to well-annotated assembled genomes to synthesized DNA constructs to metabolomics data, depending on the specific product types covered in the …

… The JGI Project Management Office carries out a number of activities to … Project Manager will facilitate project execution by: Metadata verification and coordination with IMG , GOLD and … as needed: Provide additional requested information or resources to users Coordinate meetings with DOE JGI Science …

… The DNA Synthesis Program aims to generate large datasets to explore sequence-function relationships, … innovative screening technologies and computational tools that enhance biofuel production and biosystem design. … and pathways vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose …

… train students and professors in laboratory techniques and data analyses compile original data for improving fungal genomic resources empower students through isolation and genome … comparative analysis, and distribution of fungal genome datasets. It includes JGI-sequenced and publicly available …

… Systems Biology Knowledgebase and the National Microbiome Data Collective.    … other relevant organisms. We provide access to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics through its … and contributing this information freely to the public databases. In 2004, the JGI established itself as a national …

… the idea of taking all the different natural products data that there is and putting things, coalescing them, so … basic questions that we can only really address with bigger data sets and integrated data sets. So yeah, in terms of, I … that I’ve appreciated since starting my own group is these tools, in terms of looking at the chemistry produced by …

… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … consortium recommended specific guidelines and best practices for characterizing uncultivated viruses. Following … to this point, there has been a lack of fast and accurate tools for researchers to assess the quality of …

… interactions occurring in microbiomes, these omics data must be complemented with single-cell resolution assays … to the development and maintenance of a number of viromics tools and resources. The main focus of these resource … phage proteins user-friendly integrated pipelines (MVP) and databases (IMG/VR) for viromics analyses …

… to render advice, guidance, and counsel on the effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) … JGI’s Director, CIO, and Deputies. The IAC does not perform management functions, nor does it direct the JGI CIO or the …

… SMC – which is the new Secondary Metabolism Collaboratory data portal I’ve been working on with my colleagues Drew … of always working on natural products but just different tools and how to really access and manipulate these pathways … So all of the data that will be in SMC comes from public resources. You can submit your own genomes or whatever you’d …

… Neighbor (KNN) Classification. LDA is a supervised data compression technique that was used to take the complex, high-dimensional data (the 136 tetranucleotide frequencies for each of the … under Contract No. DE-AC02-05CH11231. This research used resources of the National Energy Research Scientific …