Search

… and biogeochemistry. This research helps translate their genomic potential into practical applications, including … harnesses cutting-edge sequencing technologies and advanced genomic analysis to explore the rich diversity of fungi and … into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and …

I got him on to talk about JGI’s vision for secondary metabolism, his past in industry in developing natural … of about 75 people. So our biggest project was the spinosyn family of insecticides that Dow had already commercialized … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, …

… on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … structure – the enediyne compound that people know, as a family, it’s more than 7 decades. So, this family of … biodiversity over the past 80 years! DAN: Maybe! How much variation in that collection do you think there was? BEN: So …

… fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … The JGI Genome Portal provides unified access to all JGI genomic databases and analytical tools for all JGI … Resources … Mycocosm … Phycocosm … Phytozome … Secondary Metabolism Collaboratory …

Natural Products conference, which took place last January 2020 in San Diego. San Diego, of course, is the “home turf” … the mid-late ’80s. And at that time, you know, it’s before genomics existed. This is before we’re even thinking of … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some …

… to do some really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s … of Microbiology and Immunology , and we wish her and her family all the best during that transition. In this episode, … on increasing computational skills among biologists JGI CSP Proposal: Metagenomic mining of natural product …

The Secondary Metabolites Program offers users extensive genomics, DNA synthesis and metabolomics capabilities to … products and the science and scientists of secondary metabolism. As the JGI acts on its goals in — and builds out its capabilities for — secondary metabolism research, “Natural Prodcast” serves as an …

… a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the first … that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe … at Scripps Institution of Oceanography. He got me into genomics of microbes, specifically of some that lived in the …

… and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the Integrated … nucleotide identities (ANI) and fraction of orthologous genomic regions (Alignment fraction, AF) have been computed …

The central mission of the JGI’s Genomic Technologies department is   ensuring users have … to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation, … and further advancing sequence applications, single cell genomics, DNA synthesis, and metabolomics.   … Deputy of …

… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … Nature Reviews Microbiology 20 (5), 255-255 Schulz et al. (2020) Giant virus diversity and host interactions through … metagenomics. Nature. 578 (7795), 432-436 Schulz et al. (2020) Advantages and limits of metagenomic assembly and …

Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model systems … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and metabolomics data, shedding light on microbial metabolism and activity in natural environments. Integrating …