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Who We Are
… as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… that can be converted to energy, are made up heavily of sphagnum mosses.  New research identifies sex chromosomes in … 5% of annual greenhouse gas emissions. Understanding how sphagnum, a primary component of peatlands, processes  … was theorized that sex determination was possibly driven by genetics, or even temperature. By sequencing the genome, …
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Natural Prodcast Episode 5: Brad Moore
Not a big leap, but then we began looking at microbiomes associated with various invertebrate organisms, … was fun having, you know, working with a student who was a geneticist, having them think like a chemist and thinking … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some …
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Data Ecosystem
… will be the development of tools and infrastructure for microbiome data science, and the development of new … subject area. … The NMDC is tackling existing gaps in microbiome science through distributed data infrastructure … data technologies. The NMDC seeks to connect and engage the microbiome community to unlock new possibilities in …
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10 From JGI on the 2019 Highly Cited Researchers List
… the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, defined in the … Genomics Lead Dan Rokhsar, Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal …
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Scientific Advisory Committee
… at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to take the input from the CSP Proposal Study Panel on prioritization of CSP projects and, with concurrence from the DOE Office of …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a … analytical standards to accurately measure environmental microbiome activity levels.This functional assay lets us …
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Natural Prodcast Episode 6: Marc Chevrette
… project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s … MARC: Well, I’m really biased and I like the bugs in the microbiome. So a lot of my work is as focused on insects As … really similar to like human crops like corn. There’s low genetic diversity in the crop. So they’re susceptible to …
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Natural Prodcast Episode 16: Marcy Balunas
… converged on the study of host-microbe chemistry. And the interactions– As much as we incorporate loads of different … is usually going to be through synthetic biology or genetic engineering. But I think from what I’ve read you’ve … on increasing computational skills among biologists JGI CSP Proposal: Metagenomic mining of natural product …
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Community Science Program
The Community Science Program (CSP) provides the scientific community at large with access … of disciplines. Three calls fall under the umbrella of our CSP: The Large Scale call is for expansive projects that …
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Approved Proposals
… previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating Collaborations …
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Natural Prodcast Episode 20: Brian Bachmann
… which includes screening methods, genome mining in cave microbiomes, and using engineered biosynthetic pathways and … in the cave project just now switching from intermicrobial interactions, studying intermicrobial interactions by … Very familiar with working actinomycetes. We can also genetically manipulate them. We can do strain improvements. …
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