Search

… microbiome systems. And it makes sense because they are open. And they’re low. And things flowing– water flows into … basis. So they are full of terrestrial microbes. So they’re open ecosystems. They’re not sealed off and closed. But … encyclopedia of enzymes at Aldridge that I could use to buy green uricase or “Wittig-ase” or whatever I was looking for. …

… Open Green Genomes hits milestone with C. richardii The Science Fern … (Berkeley Lab) took on the Open Green Genome Initiative in 2018 as part of its Community Science Program. The OGG has … Open Green Genomes initiative on Phytozome …

… and a tool for predicting natural product structures from genomes. And I was writing grants furiously to try to get … Yeah. Right. Marnix Medema: This was part of a large initiative in the Netherlands at the time called Genbiotics … working with Tilmann on this. But this also has become very open to the community as well, so the versions of antiSMASH …

… pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … in is actually seeing whether we could go into the genomes and predict what the natural product might actually … But what was really interesting is when I started my lab in 2018, several papers came out right in a row all about this …

… or out of the ocean. Going to the laboratory and opening them up and looking at their chemistry was a pretty … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some … And perhaps using biocatalysts we can do it in a cleaner, greener way. That’s one of our motivations, as well. Alison: …

… Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable … nature of DOE mission science projects, this initiative aims to encourage innovative research exploiting … the capabilities of more than one facility. The FICUS initiative not only simplifies and streamlines this process, …

… the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and …

… Special Outreach Initiatives: …

… worked. And as a result, there’s been a lot of work on open pond systems and infrastructure and growing microalgae. … in Antarctica on a ship. Yeah, so I went to Antarctica in 2018 as a participant in Homeward Bound 2, last year as … there have been huge advances in both. The cool thing about genomes is you can, well, if your assembly is good, you can …

… this conversation about 10 months ago. I was pretty green at the time and had some really tedious technical … it is more related to what JGI does, which is sequence genomes. And we just published last year in the Nature … in this case EvoMining, we might be able to find any new genomes, new areas or regions or loci, that encode for new, …

… catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, … Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and archaeal lineages to … analysis and annotation of all publicly available genomes from three domains of life. It provides tools for …

… almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … find those things somewhere else out and all the different genomes and also in the chemistry.  MARCY: We isolated … products is as inclusive as it can be and that it’s an open and welcoming environment for scientists of all. Like …