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Partnerships: Adopt-A-Genome
… a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation … of microbial genomes that have been sequenced by the JGI though not formally analyzed or published.  The purpose … biological insights from sequence data, employing IMG data and tools for comparative analysis, visualization …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science … external footage from:  University of Delaware Laura.Selbmann©PNRA. All the sampling activities in Antarctica … of microbial and fungal metabolism necessary to design communities, new strains, or enzymes to convert plant …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce … the responsibility for leading the efforts to do so, and JGI expects acknowledgment (see Auspice Statement below) for …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … been the main driver for secondary metabolism drug discovery. Because we always need new antibiotics. We need new … of Biosynthetic Clusters , which is a subsection of the IMG data portal , which is a larger portal for microbial …
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Natural Prodcast Episode 17: Cassandra Quave
… a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and now COVID. We also … people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … QUAVE: So the other thing that we do on the ground with the communities themselves is really think about what are their …
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Frequently Asked Questions: Project Management
… products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about JGI’s calls for proposals , and submit your proposal online … via the Genome Portal , at the following sites: Microbes: IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted … proposals are NOT eligible for BERSS support through the JGI (with the exception of DE-FOA-0003453, which is eligible … and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted …
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Natural Prodcast Episode 1: The Primer, Part 1
… for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at … of that, that most people, I think, believe now is that the communities where this happened have a tendency to be … the bark of the yew tree, is where it was originally discovered. And so that sounds great. There’s a natural source, …
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Natural Prodcast Episode 2: The Primer, Part 2
… a little bit more giving. DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of … have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … why we are still sequencing lots of stuff, and why the JGI is a key driver in some of the science. ALISON: Very …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, … Pool of variant libraries; sample sequencing to determine coverage of variants depends on project Fungal Minimal Draft … Environmental transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments …
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Scientific Advisory Committee
Advisory Committee (SAC) is a board convened by the JGI Director to provide a scientific and technical overview of the JGI. The SAC is chartered to render advice, guidance, and … at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to take the input …
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Natural Prodcast Episode 23: Aaron Puri
… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … lab now is use these as a resource for natural product discovery because we can genetically manipulate them. I think … community. For us, it’s these methane oxidizing bacterial communities that we like to look through as a lens, and …
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