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… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … genomes that have been sequenced by the JGI though not formally analyzed or published.  The purpose of the …

… , and I’ll link out to everything in the show notes, as always, at naturalprodcast.com . And, if you can’t … circles in some way or another. But today, we have someone who, weirdly, I haven’t, I think, ever been in a room … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …

… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses on microbiome processes is still limited. One key challenge is to complement diversity surveys ( Who …

… DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the … got the chance to record this conversation. I also want to note that this episode will be monumental as the last … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …

… have to make this whole “on-time thing” a habit! I’m really not good at that, you guys. I’m trying really hard just for … him, I was working on the natural product dioxin ubiquinone, which actually comes from a marine bacterium. And so, I … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of …

… and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a … Genome to Enzymes and Pathways focuses on discovering and … vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 …

… at the JGI. The quality of the starting material is one of the greatest predictors of a successful sequencing … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? … be used to ship your samples to the JGI. Samples that have not been approved to ship or are not sent in JGI-supplied …

… Brachypodium model system traces polyploid genome evolution. … their base state, they are diploids with two genome copies, one from each parent. Having three or more genome copies … the JGI’s  Community Science Program , the team generated reference genomes for  B. hybridum and  B. stacei , as well …

… limits, and instructions.  Many of the submissions are done using web-based forms.   To view the proposal templates, … submission page , login using your JGI account (create one here if you don’t already have an account) and click the … to obtain with no guarantee of approval.    JGI staff are not eligible to submit proposals, or to be listed as co-PIs …

… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the … she’ll accept this description, but I’d say that Alison is not one of the more normal kinds of natural products people … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … which seem to be history.   I should mention that this is one of several interviews you’ll hear which we recorded at … cause liver cancer and infects peanuts and corn if they’re not stored properly. And so I read lots of your papers when …

… The Genome Insider podcast brings listeners into the science …