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JGI Portals
… Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … provides tools for analyzing the functional capability of microbial communities based on their metagenome sequence, in the … with functional annotation, taxonomic classification, and microbial host predictions.  …
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Natural Prodcast Episode 11: Marnix Medema
… IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial … effect is gone. You can transplant the effect by taking the microbial fraction out of one soil, transplanting it into … just been looking at like 16S taxonomic profiles of these communities looking at who is in there, but never like what …
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Natural Prodcast Episode 14: Nigel Mouncey
… I did my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for … spheroides . And that got me really interested in microbial gene regulation and some pathways. And I thought …
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Influence of the polar light cycle on seasonal dynamics of an Antarctic lake microbial community
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How to Target a Microbial Needle within a Community Haystack
… tested and deployed a pipeline to first target cells from communities of uncultivated microbes, and then efficiently … strides in generating genome sequences for members of the microbial world through bulk community sequencing … of HCR-FISH+FACS for selectively enriching low abundance microbial groups from complex natural communities. This type …
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JGI Accepts 17 Proposals for Community Science Program
… State University and colleagues are interested in the microbial communities that live on Alaska’s glacially dominated Copper … Arizona University is studying microbial metabolism in the Antarctic Peninsula. Additionally, the proposal from Viola …
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Plant Program
… development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working … interactions, focusing on how environmental stress and microbial communities affect plant growth and productivity. These … meraculous. It is now available for both eukaryotic and microbial metagenome assemblies. It is also available as an …
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Project Management Office
… Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow Planning Manager …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called … and they used that on all of IMG’s genomes. But IMG is microbial genomes — mostly bacteria and archaea. And we knew …
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Metagenomes in the Borderline Ecosystems of the Antarctic Cryptoendolithic Communities
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Fungal & Algal Program
… Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … The program also explores microeukaryotic members of microbial communities, cataloging gene markers, and producing …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… study suggests, is displacing these important cold-water communities of algae with warm-adapted ones, a trend that … But they vary across the global ocean. Phytoplankton communities in warmer waters, including the tropics, tend to … point to this fundamental observation of cold and warm microbial networks, and just how clear and stark the …
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