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Microbiome Data Science Team
… into data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. … global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes … Bowers RM, et al. (2017) Minimum information about a single amplified genome (MISAG) and a …
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How to Submit Sequencing Samples
… on accessing sample-level reports and tracking statuses.  Please follow the steps outlined below. Click the drop-downs to learn more about each step in the process. If you have any questions, … lists all the samples received for a project, metadata about the samples, and the sample QC results. … DNA and RNA …
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Natural Prodcast Episode 17: Cassandra Quave
… and now COVID. We also wanted to talk to her because she’s written a book about her life and her science, called The Plant Hunter , … nemesis. It almost killed me when I was three. It wasn’t an MRSA strain at the time because that was in the 1980s. I’m …
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Natural Prodcast Episode 13: Francisco Barona Goméz
Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural products and the science and scientists of … natural products systems. This conversation came about because he challenged me on my use of the term “secondary … diversity selected for. But why? I mean, why is it that our organization is spending so much resources on energy and …
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Natural Prodcast Episode 19: Bill Fenical
I learned a lot so much history from this conversation about why the ocean was basically unexplored until the 70s, and how diving was the catalyst of that. We also talk about his move to microbiology, about drug discovery and why … project,  so this is pretty comfortable territory for us, and I’m grateful to be working with him, and so happy we …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… should be coming out on the first Thursday of the month, just like I promised. Now I just have to make this whole … Chemistry and Molecular Pharmacology there. We talked about several different pieces of her work, including … nearby. And of those once we did the predictions, about 140 unique cyclic peptides. And from that, about 130 of them …
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Natural Prodcast Episode 16: Marcy Balunas
… than anyone else.  DAN: Yeah. I mean fine in pandemic adjusted terms right?  MARCY: Yes–  ALISON: Yeah.  MARCY: … like I can sort of see when I’m doing the work or thinking about something I can kind of see like the squid and the … the things that we’ve come to there is that co-culture with MRSA, with methicillin resistant Staphylococcus aureus, …
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Natural Prodcast Episode 12: Nadine Ziemert
Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the science and scientists of … on my bed in Paris, pointing a microphone at my face because I didn’t want to be in the other room where the kids are … was around chemical identification technology, mass spec, NMR. And we talked a little bit about what it would take to …
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Natural Prodcast Episode 11: Marnix Medema
Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the science and scientists of … on genome mining. In the last episode , Alison and I talked about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, …
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Events
…  Learn about meetings the JGI is hosting:   … New Lineages of Life … out where our researchers will be presenting next. Learn about upcoming user-focused webinars and workshops we're hosting. …
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Natural Prodcast Episode 20: Brian Bachmann
Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First and foremost, our … screening methods, genome mining in cave microbiomes, and using engineered biosynthetic pathways and enzyme systems to … the JGI website at jgi.doe.gov . There’s a lot more to talk about there, and I’ll be getting together a proper …
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DNA Synthesis Program
… effort in functional genomics since 2012, with a focus on addressing critical energy and environmental … by the Joint BioEnergy Institute for managing information about biological parts, capable of recording information about 'legacy' parts.  … The guideRNA and Sequence …
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