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The JGI announces FY25 awardees for our Community Science Program Annual Call
… excited to announce the 18 scientists selected for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped by dam removal to …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… to provide a cataloged and curated culture and genome sequence resource of rumen microorganisms . Thanks to the … aim is identifying chemical compounds that could inhibit microbial methane production. Another effort is in using … rumen microbes are awesome and this is just another example why.” …
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Complete Genome Sequence of the Plant Growth-Promoting Endophyte Burkholderia phytofirmans Strain PsJN
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Genome sequence of the plant growth promoting endophytic yeast Rhodotorula graminis WP1
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Genome Sequence of Amycolatopsis sp. Strain ATCC 39116, a Plant Biomass-Degrading Actinomycete
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Analysis of Plant Pan-Genomes and Transcriptomes with GET_HOMOLOGUES-EST, a Clustering Solution for Sequences of the Same Species
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Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism
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Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
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A More Intuitive Phytozome Interface
… BioMart data warehouse interfaces they have come to rely on from Phytozome, with a more intuitive interface, deployed on … Questions about the transition from Phytozome v12 to v13. Why is it necessary to retire Phytozome v12? The codebase … preset for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … the completeness of these sequences and complements a community effort to develop guidelines and best practices …
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Sequencing of Genomes from Environmental Single Cells
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome … a condition known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic … and the  oilseed crop false flax – genomes that have been sequenced by the JGI – and the common strawberry, which is …
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