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A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism
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Fungal community response to long‐term soil warming with potential implications for soil carbon dynamics
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Genomic insights into redox-driven microbial processes for carbon decomposition in thawing Arctic soils and permafrost.
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Reactive iron, not fungal community, drives organic carbon oxidation potential in floodplain soils
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Oxic–anoxic cycling promotes coupling between complex carbon metabolism and denitrification in woodchip bioreactors
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JGIota: Looking Back at Sequencing for Soybeans
… So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, researchers have been able to look into soybean’s strengths – along with a fungus that …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing … of enzymes.” Gribaldo will be speaking on “Exploration of Metagenomic Data to Understand the Diversity and Evolution …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is wilder … artificially replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the … the process hinges on referencing to existing genome sequences.  Some of these proteins are what the scientists …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… of infecting different host species? Or, do they tend to specialize, infecting just a single host? Another wrinkle … painting a more systematic picture through single-cell and metagenomic sequencing. A team co-led by Mária Džunková, … National Laboratory, used single-cell sequencing to sequence both a cell’s genome and detect accompanying viral …
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Community‐Level Metabolic Shifts Following Land Use Change in the Amazon Rainforest Identified by a Supervised Machine Leaning Approach
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Purifying the Impure: Sequencing Metagenomes and Metatranscriptomes from Complex Animal-associated Samples
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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