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Tetranucleotide frequencies differentiate genomic boundaries and metabolic strategies across environmental microbiomes.
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A bloom of a single bacterium shapes the microbiome during outdoor diatom cultivation collapse
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Conserved environmental adaptations of stream microbiomes in the hyporheic zone across North America
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Animal-associated jumbo phages as widespread and active modulators of gut microbiome ecology and metabolism
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Nikos Kyrpides
… National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel … compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . 6(7):960-970. Nayfach S, et al. …
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Improving the Cacao Genome and Phytozome
… to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years … through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  HudsonAlpha …
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Emiley Eloe-Fadrosh
… She conducted her postdoctoral training in human microbiome research at the Institute for Genome Sciences at … in 2017. She also leads the DOE’s multi-lab National Microbiome Data Collaborative (NMDC). Prospective users with … Kelliher JM, et al. 2023. Cohort-based learning for microbiome research community standards. Nat Microbiol . …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Ivanova, senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… to as natural products, the proposal includes plans to sequence several thousand Actinobacteria strains and then … through photosynthesis, but only a fraction have been sequenced.  Adriana Lopes dos Santos from Singapore’s … in developing mutant populations of the bioenergy feedstock crop  Camelina sativa , and generating their  genome …
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Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale
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Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
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Heterospecific Neighbor Plants Impact Root Microbiome Diversity and Molecular Function of Root Fungi
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