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Informatics Advisory Committee
The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, … the effective management and strategic objectives for the JGI’s data science, informatics and information technology …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles … analysis.   Overview of metabolomics products At JGI, in-depth molecular profiles are generated for …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … in rhizosphere microbial community assembly. Nat Microbiol. 2018;3: 470–480. 7. Louie KB, Bowen BP, McAlhany S, Huang Y, …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in … remained largely untouched until seven years later. In 2018, as members of the ZyGoLife consortium , my colleagues …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school … ranging from wetlands to tree islands to cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (Berkeley Lab) took on the Open Green Genome Initiative in 2018 as part of its Community Science Program. The OGG has …
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JGI-UC Merced Interns Share Their 2021 Experiences
… from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone … year and continue working on their research project! The JGI-UC Merced internship program was founded in 2014 with … Analysis of Genus Roseovarius … Implementing a Scalable JGI-RQC Pipeline on the Cloud …
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JGI-KBase Panel at SACNAS
… through the Department of Energy-funded National Labs, User Facilities and Programs, and introduce best practices for anyone to get …
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Gene Expression: From On-Off Switch to Dial
… systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Nikos Kyrpides
Achievement Award (2022) ASM’s USFCC/J. Roger Porter Award (2018) Honorary Doctorate from the Aristotle University of …
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Gut Fungi: Unexpected Source of Novel Chemicals
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Sciences Laboratory (EMSL), a DOE Office of Science user facility at Pacific Northwest National Laboratory. The …
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Training the Next Generation of Talent
New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his … Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the … that would allow users to simultaneously run several programs for RNA-Seq assembly to determine which is best for …
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