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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… from this cohort and their JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and mentor Vy Duong, … Graduate Interns Tahirah Williams and mentors Igor Grigoriev and Bishoy Kamel, A Comparative Analysis of …
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Niche differentiation of bacteria and fungi in carbon and nitrogen cycling of different habitats in a temperate coniferous forest: A metaproteomic approach
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Metabolic profiling of two white-rot fungi during 4-hydroxybenzoate conversion reveals biotechnologically relevant biosynthetic pathways
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Diversity of genomic adaptations to the post‐fire environment in Pezizales fungi points to crosstalk between charcoal tolerance and sexual development
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A remarkable expansion of oligopeptide transporter genes in rust fungi (Pucciniales) suggests a specialization in nutrients acquisition for obligate biotrophy.
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
JGI’s user community has helped propel multiple efforts along these lines, all with the goals of better data … labeling for these experiments.  This group included Elisha Wood-Charlson, User Engagement Lead for the DOE Systems … are still growing priorities for researchers in this area. “Surprisingly, this was the first workshop of its kind …
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JGI@25: Using Team Science to Build Communities Around Data
… 1000 fungal genomes to create two reference genomes for all fungi families — essentially, the foundation for an … Riverside would focus on broad sampling of early diverging fungi, and Francis Martin of the French National Institute … from James Leebens-Mack of the University of Georgia, along with 100 of his colleagues in the comparative plant …
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Guttation capsules containing hydrogen peroxide: an evolutionarily conserved NADPH oxidase gains a role in wars between related fungi
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… to make really good contributions to the project. Also my area of expertise over the past couple years is a little bit … long Python workshop. And I’m excited to take that with me, along with other tools that I can use to, um, perform …
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Tanja Woyke Elected to American Academy of Microbiology
… and Systems Biology Division of the Lab’s Biosciences Area since 2018. Woyke also holds appointments as Adjunct … viruses (NCLDV) supergroup. As a result, the giant virus protein space grew from 123,000 to over 900,000 proteins, and … push the boundaries of energy and environmental genomics.” Along with Woyke, two JGI users were also elected to the …
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Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus
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Genomic characterization of three marine fungi, including Emericellopsis atlantica sp. nov. with signatures of a generalist lifestyle and marine biomass degradation
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