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… Interns contributed to a number of projects, from refining … Jasmyn Pangilinan, Kurt LaButti Project:  Prediction and Identification of Mitochondrial Plasmids from DNA Sequence Moitrish Majumdar Mentors: Bikash Shrestha, Crysten …

… The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … partner, either a eukaryotic microalga or a cyanobacteria, is known as the “photobiont.” Photobiont and … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared …

… In honor of the JGI's 25th anniversary in 2022, we have … To find an explanation, his team tracked the thousands of bacterial and archaeal species using a DNA-based array … The JGI’s single cell genomics expertise led to the identification of a new “oil-seeking” species related to …

… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better understand how beneficial … with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) as … by the National Science Foundation and the National Institutes of Health. The work conducted by the U.S. …

… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … a step further, using both DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, …

… Using a novel computational approach, researchers confirm … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire genetic … that the majority of these protein families belonged to bacteria and viruses, though 6 million of the sequences …

… Now, with improvements to DNA Affinity Purification Sequencing (DAP-seq), these barriers are falling. As  … high-quality single-nuclei transcriptomes, enabling the identification of dozens of unique cell types in plants such … gene regulation. Together, these binding sites mark ancient regulons, or gene networks conserved throughout evolution.  …

… change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  Microbiome shows … 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …