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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species decompose debris, mobilize …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest … proposals highlight biodiversity and how ecosystems are adapting to stresses. A total of 17 proposals have been … interact with their environment, potentially accelerating soil carbon loss. Orange ribbons mark the heated plots and …
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Respiratory processes of early-evolved hyperthermophiles in sulfidic and low-oxygen geothermal microbial communities
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JGI Early Career Researchers Featured in mSystems Special Issue
… issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the … Communications paper, uncovering giant virus sequences in soil for the first time. A second approach known as DNA … While microbes regulate the planet’s biogeochemical cycles, viruses infecting microbes shape global ecological and …
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Niche differentiation of bacteria and fungi in carbon and nitrogen cycling of different habitats in a temperate coniferous forest: A metaproteomic approach
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Partnerships: Myco-Ed
Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching … protocols, course materials and bioinformatics exercises are freely available through the links below. Naturalist … Community. This group enables instructors to create and share teaching resources utilizing KBase. KBase integrates a …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is … of living. The Impact Microbes help regulate the global carbon cycle — fixing, transforming, and respiring carbon. … were also processed using the JGI-developed software suite, BBTools , and relying on the JGI Integrated …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … All of these genome sequences and the tools to compare them are available on the JGI’s Integrated Microbial … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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JGI@25: Building a Better Bean
… to their economies. It also plays an important role in soil health through nitrogen-fixation and holds clues for … June 8, 2014 in the journal Nature Genetics . “Common beans are a major societal crop for those with severely limited … and time-consuming and involved a lot of different players and researchers across many different labs to be …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … of gene expression in over 400 fungi species. “Fungi are the masters of adaptation,” Wint explained. The fungal …
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Methanogenesis in oxygenated soils is a substantial fraction of wetland methane emissions
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