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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … Chlamydomonas has this related protein that’s also causing DNA damage,” Merchant said, “that something is wrong with …
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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … Volland et al. 2022.   A centimeter-long bacterium with DNA contained in metabolically active, membrane-bound … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared … from the Duke Institute of Genomic Sciences and Policy (for DNA sequencing and assembly); by a three-year subcontract to …
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Community Science Program
… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey at Duke University and … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens
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Antarctic archaea–virus interactions: metaproteome-led analysis of invasion, evasion and adaptation
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Giant virus diversity and host interactions through global metagenomics
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Single-cell genomics-based analysis of virus–host interactions in marine surface bacterioplankton
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Virus-Host Interactions and Genetic Diversity of Antarctic Sea Ice Bacteriophages
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BinaRena: a dedicated interactive platform for human-guided exploration and binning of metagenomes
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a … candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a … large polyploid genome, which means most genes are found as multiple copies across the chromosomes. In a follow-up study …
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