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Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
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Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa
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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
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Analysis of saccharification in Brachypodium distachyon stems under mild conditions of hydrolysis
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Denoising inferred functional association networks obtained by gene fusion analysis
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1001 Proteomes: a functional proteomics portal for the analysis of Arabidopsis thaliana accessions
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Behind the Paper: Hot Springs Metagenomics
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A Bioinformatician's Guide to Metagenomics
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in … a very high quality reference S. viridis genome sequence. Analysis of these plant genome sequences also led … that green millet was introduced into the United States multiple times from Eurasia. The team also identified a gene …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … of this is based on a really great paper that came out in 2020 where this is all explained in detail, so if you’d like … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications.       Despite advances in sequencing …
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, functional … and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department …
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