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The trajectory of microbial single-cell sequencing
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Simon Roux
… in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new experimental approaches to link … knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research …
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Rapid whole-genome mutational profiling using next-generation sequencing technologies
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Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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Microbial species and intraspecies units exist and are maintained by ecological cohesiveness coupled to high homologous recombination
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Host species and geographic location shape microbial diversity and functional potential in the conifer needle microbiome
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… applied to samples collected from acidic iron-oxide microbial mats in Yellowstone National Park over time, … role in the development of life on Earth; the iron-oxide microbial mats at Yellowstone offer researchers an analog … the JGI’s Community Science Program , the team used metagenome assemblies, transcriptomes and single amplified …
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Decoding Yellowstone’s Microbial Mats
… Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered … new technologies, and made a few discoveries about the microbial mat denizens.  …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … on the effective management and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… at work around the globe Keynote Talk Title : “Wild Microbial Ecology” Microbial ecologist  Bruce Hungate , of … flow — quantitative rates of element flow — to individual species?” As Hungate shared his approach to those questions … Newman’s work here . Edward Holmes, University of Sydney Using protein structures to assess scope of the virosphere …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern … of defense mechanisms. The Impact There are over 10,400 species of ferns alive today. Boasting adaptations in order … hoarding had been thought to be the result of multiple whole-genome duplications. The process of genome-doubling, …
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