Results

Rhizosphere and detritusphere habitats modulate expression of soil N-cycling genes during plant development
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Time‐series metatranscriptomes reveal conserved patterns between phototrophic and heterotrophic microbes in diverse freshwater systems
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Metatranscriptomic Sequencing of Winter and Spring Planktonic Communities from Lake Erie, a Laurentian Great Lake
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm … there has been no real analysis of protein families from metagenomes per se.”  Recently, other research teams have …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data … being recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
As SIP experiments shed more light on microbial communities … hundreds of stable isotope probing genome-resolved metagenomes and will be implementing new tools in KBase to …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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Behind the Paper: Hot Springs Metagenomics
Adapting the graduate research experience amidst a global pandemic   …
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Transcriptomic analysis highlights epigenetic and transcriptional regulation during zygotic embryo development of Pinus pinaster
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Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill
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The ectomycorrhizal fungus Pisolithus microcarpus encodes a microRNA involved in cross-kingdom gene silencing during symbiosis
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Gallionella and Sulfuricella populations are dominant during the transition of boreal potential to actual acid sulfate soils
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