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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. Viruses play … at Colorado State University have many questions about the microbial communities deep underground, and before the …
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IMA genome-F18
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Tanja Woyke Elected to American Academy of Microbiology
Tanja Woyke , who has been elected to the American Academy of Microbiology (AAM) ! She is among the 68 new Fellows in … National Laboratory (Berkeley Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the Single … led a team that reconstructed more than 2,000 genomes of large and giant viruses belonging to the nucleocytoplasmic …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a … hold clues to how humans could do the same on an industrial scale to produce biofuels . Since one of the challenges of … to facilitate the assembly of small DNA fragments into larger and coherent pieces called contigs — into genes and …
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A Comparison of Microbial Genome Web Portals
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The Integrated Microbial Genome Resource of Analysis
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Comparative Genomics of Saccharomyces cerevisiae Natural Isolates for Bioenergy Production
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Draft Genomes of Gammaproteobacterial Methanotrophs Isolated from Terrestrial Ecosystems
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Seven genome sequences of airborne, bacterial isolates from Antarctica.
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … National Laboratory (Berkeley Lab). “This represents the largest integration of single-cell datasets in plants and … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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Microbial colonization and persistence in deep fractured shales is guided by metabolic exchanges and viral predation
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Gut Fungi: Unexpected Source of Novel Chemicals
The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … ruminant fluid — which smells terrible —they were able to isolate four strains: Anaeromyces robustus , Caecomyces … the compounds. Although what compounds they make is still largely a mystery, anaerobic fungi clearly have unexpected …
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