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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… the evolutionary past may hold key insights. The way that plants process nutrients has a rich back story — they rely … billions of years. However, these enzymes are often loosely understood, leaving potential targets for crop engineering … work was our focus on all the kingdoms, including animals, plants, bacteria, archaea and fungi. We thought this kind of …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… flagellum, a feature demonstrating the common ancestry between fungi and animals. Olpidium attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … genetic material with various origins, ranging from fungi, plants to bacteria. Back in 2011 when these genome and …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… coli , allowing the team to model the competition dynamics between different synthetic  E. coli strains in co-culture. … Ralstonia with enzymes that make phosphate bioavailable for plants. When these engineered bacteria were used with the … — a proof-of-principle for investigating plant-microbe interactions. A final recent advance in CRAGE is the …
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iPHoP: A Matchmaker for Phages and their Hosts
… these microbes. A better understanding of virus-host interactions opens the possibility of using phages to … it predicted many more likely hosts for viruses in human microbiome samples, reflecting factors such as the quality … microbiome data. In other environments, such as terrestrial soil, having additional isolates and metagenomic datasets …
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A Molecular Study of Microbe Transfer between Distant Environments
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A multi-omic characterization of temperature stress in a halotolerant Scenedesmus strain for algal biotechnology
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A Genomic Catalog of Stress Response Genes in Anaerobic Fungi for Applications in Bioproduction
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The genomic landscape of molecular responses to natural drought stress in Panicum hallii
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Variation in Adult Plant Phenotypes and Partitioning among Seed and Stem-Borne Roots across Brachypodium distachyon Accessions to Exploit in Breeding Cereals for Well-Watered and Drought Environments  
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… which affects a number of environments, including plants, soil, and the gut. To better understand the dynamics of this … which can affect pathogenic and symbiotic bacterial interactions with animals and plants, or cause metal … by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. This work was …
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Igor Grigoriev
… analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program … Nelson et al (2022) Wildfire-dependent changes in soil microbiome diversity and function.  Nature Microbiol. … Genetic Changes Associated with the Evolution of Vascular Plants.  Science, 2011; 332: 960-963. Colbourne JK et al. …
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Genetic determinants of endophytism in the Arabidopsis root mycobiome
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