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Single mutation at a highly conserved region of chloramphenicol acetyltransferase enables isobutyl acetate production directly from cellulose by Clostridium thermocellum at elevated temperatures
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A Sorghum Pangenome Opens More Doors to Discovery
… has focused on producing high-quality reference genomes. By cataloguing a genome sequence for a line of sorghum, … drought tolerance, biomass production and more — however, a single reference genome shows only one slice of the … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular … and engineering. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging …
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Exploring novel alkane-degradation pathways in uncultured bacteria from the North Atlantic Ocean
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Toward More Efficient Artificial Photosynthesis
… cycle. The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials … to convert them into energy that is then stored. A team led by researchers at the Max Planck Institute (MPI) for … Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that …
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… species? Or, do they tend to specialize, infecting just a single host? Another wrinkle in the mystery is that viruses … kill outright, replicating so thoroughly that they lyse the cell — a process called lytic infection. But some viruses … This work,  recently published in  The ISME Journal , by contrast, relied on methods that eschew culturing, …
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JGI on the 2021 Highly Cited Researchers List
… Researchers at the JGI! They are among those recognized by Clarivate Analytics for demonstrating “significant … influence in their chosen field or fields through the publication of multiple highly cited papers during the last … past year, through programs including the JGI-UC Merced Genomics Internship Program and the DOE Office of Science …
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Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii
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A Collaboration to Improve Plant Genome Annotations Across Species
… of RNA molecules transcribed from all the genes within a cell or tissue at a specific time or under specific … difficult. Our Plant Gene Atlas resource addresses that by providing standardized experimental conditions, tissue … handling 18 different species is beyond the capacity of a single lab. Growing different species poses significant …
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Mapping the Earth’s Hidden Fungal Kingdom
… Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … mushrooms and yeasts, outnumber their ancient relatives by nearly 10 to one in sequenced collections. Yet the … evolutionary innovations. Some entire lineages have only a single genome representative, while others remain completely …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved … functions across different forests. Primary metabolism, cell activity, and fungal development looked quite alike for … that both guilds express similar genes for degrading fungal cell walls, the so-called fungal necromass, suggesting these …
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