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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Comparative Analyses of Four Reference Genomes Reveal Exceptional Diversity and Weak Linked Selection in the Yellow Monkeyflower (Mimulus guttatus) Complex
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The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … the effects of radiation exposure to human health. Three DOE national labs had people and resources focused on … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Fungal Friends or Foes in Plant Roots
… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … of plant root microbiome and other microbiomes by providing reference genomes of the key community participants and … grant (MICRORULES 758003), the ‘Priority Programme: Deconstruction and Reconstruction of the Plant Microbiota (SPP …
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High quality draft genome sequences of Pseudomonas fulva DSM 17717T, Pseudomonas parafulva DSM 17004T and Pseudomonas cremoricolorata DSM 17059T type strains
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Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons
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Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample
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NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … diversity tests showed significant congruity between three sites. There was slight congruity between all the … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Draft genomes and assemblies of the ectomycorrhizal basidiomycetes Scleroderma citrinum hr and S. yunnanense jo associated with chestnut trees
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Finding the Fermenters
… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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