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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that …
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Phylogenomics suggests oxygen availability as a driving force in Thaumarchaeota evolution
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Increasing the Thermodynamic Driving Force of the Phosphofructokinase Reaction in Clostridium thermocellum
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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is … Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … research and tips for submitting successful proposals: Collaborate With a U.S. DOE User Facility: Learn About …
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NeLLi — Symposium on New Lineages of Life
… “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the … archaeal and microeukaryote diversity cataloged and taxonomically classified to date. Under the “sequence to …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s population, the number of …
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Learning to Look
Machine learning approach significantly expands inovirus … “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … of Science User Facility, developed an algorithm that a computer could use to conduct a similar type of search in …
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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast …
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Extracting the Secrets of Secondary Metabolites
CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  … secondary metabolites, those molecules not essential for growth yet essential for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
For the first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  … . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the …
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