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Biases in genome reconstruction from metagenomic data
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A metagenomic perspective on the microbial prokaryotic genome census
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Metagenome Sequencing to Explore Phylogenomics of Terrestrial Cyanobacteria
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Metagenomes in the Borderline Ecosystems of the Antarctic Cryptoendolithic Communities
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Extreme Scale De Novo Metagenome Assembly
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Visualizing metagenomic and metatranscriptomic data: A comprehensive review
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Metagenomic Sequencing of Two Salton Sea Microbiomes
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JGI Hosts GPU Hackathon in May
May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance computing … Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … HPC systems – our data and compute challenges aren’t getting any smaller and we need to keep pace with changes in …
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Introducing New Members of the JGI User Executive Committee
JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell … activity-based cell sorting pipelines to further the link between cellular phenotypes and genotypes. Pawlowska, who … she noted, “I would also like to offer my insights in promoting diversity, equity and inclusion (DEI) in STEM …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … Lab) describe a computational pipeline that can specifically scan for those snowflakes, or RNA virus sequences. … one of the senior authors on the paper, of the uncovered viral diversity. “Although the technical challenges of data …
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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have revisited a … “There was oil on the surface and oil below, but no oil in between.” To find an explanation, his team tracked the … Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in several Lab …
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Tackling soil diversity with the assembly of large, complex metagenomes
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