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Genome expansion by allopolyploidization in the fungal strain Coniochaeta 2T2.1 and its exceptional lignocellulolytic machinery
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DOE Metrics
Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 Total 700.0     … hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators …
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Enlarging Windows into Understanding Gene Functions
… of the alphabet. Yet the specific sequence of these four letters represents an organism’s genetic code, or … encoded in the genome sequence is part of the integrative science mission of the U.S. Department of Energy (DOE) Joint … the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We …
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Exploring and Thinking Critically about Scientific Problems with JGI Interns
While summer interns at the JGI from multiple programs had their own goals to achieve, … with each other on new ways of presenting and researching science. …
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The Impact of Genome Analyses on Our Understanding of Ammonia-Oxidizing Bacteria*
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JGI@25: Building a Better Bean
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … Phaseolus as a test model quite frequently for R&D in plant genomics, because it is an inbred dicot,” Schmutz explained, …
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Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay
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Tracking of enzymatic biomass deconstruction by fungal secretomes highlights markers of lignocellulose recalcitrance
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A plant host, Nicotiana benthamiana, enables the production and study of fungal lignin-degrading enzymes
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Selinene Volatiles Are Essential Precursors for Maize Defense Promoting Fungal Pathogen Resistance  
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Fungal heavy metal adaptation through single nucleotide polymorphisms and copy‐number variation
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A thousand-genome panel retraces the global spread and adaptation of a major fungal crop pathogen
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