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The Surprising Structure of a Shrub Willow Sex Chromosome
A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, … specimen. Stephen DiFazio, plant biologist at West Virginia University (WVU), led the study’s international team, which … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. The JGI sequenced the shrub …
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From Textbook to Real World Applications
When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in learning more about the principles of synthetic biology, Robert Evans and Jan-Fang Cheng in the …
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PhycoCosm Tutorial
… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative … by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, Alan Kuo, Sara …
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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new experimental … Virus Genome (MIUViG). Nature Biotechnology 37, 29–37. Berg et al., 2021. Host population diversity as a …
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I-Min (Amy) Chen
… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol Model (OPM) data management tools for scientific applications developed at Berkeley Lab. Dr. Chen is currently the Microbiome …
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SIPs with Standards
SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to … This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few different ways they're working to … more reusable, and more insightful, for the future of studying microbial communities.   …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
… to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …
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JGI Announces 2023 Community Science Program Awardees
Congratulations to the proposers of the 19 proposals selected for the 2023 Community Science … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “We’re very … these PIs will address a broad diversity of important scientific questions relevant to the DOE mission, and we look …
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2023 Progress Report
… for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… on plants and microbes, Trent Northen’s group at Berkeley Lab created a fabricated ecosystem – an EcoFAB. These small plastic growth chambers let researchers … around the world compare their work consistently. And EcoFABs also work well in the classroom. This episode, we …
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You Can Move, But You Can’t Hide
… at the JGI develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The … to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory (Berkeley Lab), with computing …
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Ben Bowen
… in their bioenergy and environmental objectives. … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … State University, Bioengineering & Metabolic Biology … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 …
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