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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it looks like a … But if the duck gets infected by a virus so that it no longer looks or quacks like one, is it still a duck? For a … in 2011 which reflects the metabolic changes they’ve undergone. The Impact The number of microbes in, on, and around …
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Complete Genome Sequence of Rahnella aquatilis CIP 78.65
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XA21-mediated resistance to Xanthomonas oryzae pv. oryzae is dose dependent
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications The planet’s … could bias the analyses. MAGs could also represent composites of populations where individual strains are collapsed, …
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Crysten Blaby-Haas
University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in … Blaby-Haas CE. (2024) A hemoprotein with a zinc-mirror heme site ties heme availability to carbon metabolism in … oxidase assembly factor CcoG is a widely distributed novel cupric reductase. PNAS  116(42): 21166-21175. PMID: 31570589 …
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JGI Hosts GPU Hackathon in May
… high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility … Office of Science user facility, aims to explore applications in the life sciences that can be ported to the GPU architecture. A GPU hackathon is a five-day coding event that offers participating …
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their … intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters (BGCs) in native hosts, the …
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Rex Malmstrom
… is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant bacterial …
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Insights into the Effects of Long-Term Artificial Selection on Seed Size in Maize
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Fixation-free fluorescence in situ hybridization for targeted enrichment of microbial populations
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The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
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Microbiome–metabolite linkages drive greenhouse gas dynamics over a permafrost thaw gradient
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