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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
Back in 2011, JGI-supported researchers published a paper in the journal … metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State University campuses for biotechnology education as part of a course-based undergraduate resource …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to … as part of the Marine Microbiology Initiative. She conducted her postdoctoral training in human microbiome research …
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Partnerships: Myco-Ed
The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. … The …
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Partners
The JGI leverages its existing partnerships and develops others … and other efforts. The JGI works closely with DOE computational facilities (e.g., the National Energy Research … Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase …
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … computational analysis.   Overview of metabolomics products At JGI, in-depth molecular profiles are generated for …
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Project Management Office
The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users … capabilities to help advance their science by generating data in three overarching categories: Sequencing, … with  Science Programs and  Operations enable the JGI to focus on expanding molecular capabilities and …
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JGIota: A Biofuel Breakthrough in Anaerobic Fungi with Michelle O'Malley and Tom Lankiewicz
Michelle O’Malley and Tom Lankiewicz of UC Santa Barbara discuss the importance of studying anaerobic fungi, as well as a recent discovery that turns scientific presumption on its head and opens up a new avenue to explore for efficient biofuel production. …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … turn affecting environmental and human health, energy production and agriculture. Understanding the compositions of … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted … are strongly sorbed to the clays. Sandy soils are much more likely to work well for metabolomics.  Q:  What …
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