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2022 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic entities … is now accessible through the National Microbiome Data Collaborative’s EDGE platform. The Impact In order to gain …
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Computationally Classifying Fungal Lifestyles
… on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved …
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Natural Prodcast Episode 13: Francisco Barona Goméz
Natural Prodcast– a podcast about natural products and the science and scientists of secondary metabolism. Hey … thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published … in partnering with us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, …
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Sequencing Technologies
… sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has allowed the JGI to increase sequencing output while significantly … hand with the Project Management Office to help ensure the JGI’s genomic capabilities are ready and applicable to …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and the data has been …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the … followed. I especially want to emphasize the inclusive, collaborative working environment I have consistently … UC Merced graduate students who participated in the Summer 2015 research experience at the JGI as part of an education …
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Refining the Process of Identifying Algae Biotechnology Candidates
… [subhed -- copy to summary above^ as well ] The Science The recipe for growing algae as a source of … national laboratories are working toward that goal. In a collaborative effort published in Communications Biology , a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Building Sphagnum Genomic Resources
… insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are … draft genome for  S. fallax is already available on the  JGI plant portal Phytozome , and the S. magellanicum genome …
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