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… Scientists have discovered that the candidate bioenergy feedstock switchgrass … habitat range. But at what cost?  A collaborative team led by researchers at the University of Texas (UT) at Austin, … and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued to … the origin, evolution, and diversity of plants and animals by combining computational genome analysis, sequence-based …

… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the … the genomes, write reports, and publish first-author papers, making the data available for future research. Hear … (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State …

… the value of conducting large-scale single cell genomics by collecting nearly 500 single cells from a single low … mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant … sampled hot spring, a dataset of nearly 500 single cells covered the diversity of most taxa within the sample. …

… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint Genome …

… Information, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … at the NCBI and one of the senior authors on the paper, of the uncovered viral diversity. “Although the … viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as DNA viruses, RNA viruses …

… Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final six …

…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science … The battle waged below the Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) … of countering multiple attempts at virus infections. Their genomes include short DNA sequences that code for CRISPR …

… 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. Last year, the … For example, with support from the  Exascale Computing Project , the JGI — along with the National Energy Research … to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the …

… of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), … partnership had become a “model” of sorts at the Lab. “This project represents part of our long term efforts to … relevant are service and respect, and I live these values by being able to pass along my knowledge to them as best as …

… website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  v13, which now hosts upwards of 250 plant genomes and has been under active development for over 5 … possible given the finite staff available to the Phytozome project. What will happen to Phytozome v12 URLs after August …

… studying actinomycetes and the focus of a  recent paper published in  Microbial Genomics .   “Studying … a scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … are still so many chemical compounds that have not been discovered that can be produced as secondary metabolites by …