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Homoeolog expression divergence contributes to time of day changes in transcriptomic and glucosinolate responses to prolonged water limitation in Brassica napus
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes … and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating … of the sequences from a bulk metagenome, to just over 50 percent of the targeted metagenome sequence reads. This …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes … the remixing of genes in the next generation of flowering vegetation. In return for their services, bees eat plant … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department of …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI … Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more targeted approaches to reconstruct individual microbes in an … sample beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … support through the JGI (with the exception of DE-FOA-0003453, which is eligible for BERSS). Available Resources All … science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …
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Natural Prodcast
… to the chemicals that make species unique and different from one another. They are incredibly important to medicine, the environment, and human health. As the JGI acts on …
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Metagenomes and Metagenome-Assembled Genomes from Microbiomes Metabolizing Thin Stillage from an Ethanol Biorefinery
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent … stories, told through print narratives, videos, a podcast episode, and presentations below. … … … … … … … … … … … … … … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? … Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … that if you rewire a cell in vivo that you’re going to get that same type of effect in vitro . This really …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … by the Office of Science of the DOE Contract DE-AC02-05CH11231. D.P. is supported in part by the Berkeley …
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A Catalog of Reference Genomes from the Human Microbiome
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Sequencing of Genomes from Environmental Single Cells
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